Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein motb | BST98_RS10995 | Not Available | Negative | 2344905 - 2345849 | 34763.2 |
| flagellar motor protein poma | BST98_RS11000 | Not Available | Negative | 2345859 - 2346620 | 27424.1 |
| exodeoxyribonuclease vii small subunit | BST98_RS11005 | Not Available | Positive | 2346860 - 2347102 | 8947.44 |
| (2e,6e)-farnesyl diphosphate synthase | BST98_RS11010 | Not Available | Positive | 2347095 - 2347994 | 32631.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BST98_RS11015 | Not Available | Positive | 2348019 - 2349884 | 68245.5 |
| hypothetical protein | BST98_RS11020 | Not Available | Negative | 2350003 - 2352090 | 79888.3 |
| hypothetical protein | BST98_RS11025 | Not Available | Positive | 2352234 - 2352473 | 8909.13 |
| phosphatidylglycerophosphatase a | BST98_RS11035 | Not Available | Negative | 2352598 - 2353083 | 17945.4 |
| thiamine-phosphate kinase | BST98_RS11040 | Not Available | Negative | 2353120 - 2354106 | 34973.5 |
| transcription antitermination factor nusb | BST98_RS11045 | Not Available | Negative | 2354191 - 2354661 | 17781.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

