Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator bola | BST98_RS10945 | Not Available | Negative | 2335699 - 2336010 | 11688.8 |
| methyltransferase | BST98_RS10950 | Not Available | Positive | 2336124 - 2337248 | 41935.8 |
| yajg family lipoprotein | BST98_RS10955 | Not Available | Positive | 2337276 - 2337860 | 21406.8 |
| peptidylprolyl isomerase | BST98_RS10960 | Not Available | Positive | 2337860 - 2338411 | 19910.3 |
| hypothetical protein | BST98_RS10965 | Not Available | Positive | 2338455 - 2338814 | 13754.1 |
| ampg family muropeptide mfs transporter | BST98_RS10970 | Not Available | Positive | 2338939 - 2340324 | 50638.6 |
| outer membrane protein ompk | BST98_RS10975 | Not Available | Positive | 2340670 - 2341473 | 30004.1 |
| 2-dehydropantoate 2-reductase | BST98_RS10980 | Not Available | Positive | 2341635 - 2342534 | 34169.8 |
| dj-1 family glyoxalase iii | BST98_RS10985 | Not Available | Positive | 2342527 - 2343144 | 21693.2 |
| trna uracil 4-sulfurtransferase thii | BST98_RS10990 | Not Available | Negative | 2343283 - 2344731 | 54375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

