Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-histidine dipeptidase | BST98_RS10895 | Not Available | Positive | 2324895 - 2326355 | 52700.3 |
| dna polymerase iv | BST98_RS10900 | Not Available | Negative | 2326423 - 2327502 | 40945.7 |
| (na+)-nqr maturation nqrm | BST98_RS10905 | Not Available | Negative | 2327749 - 2327970 | 8010.86 |
| fad:protein fmn transferase | BST98_RS10910 | Not Available | Negative | 2327986 - 2329011 | 37776.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | BST98_RS10915 | Not Available | Negative | 2329240 - 2330463 | 45215.0 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | BST98_RS10920 | Not Available | Negative | 2330487 - 2331083 | 21546.2 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | BST98_RS10925 | Not Available | Negative | 2331091 - 2331723 | 22771.6 |
| na(+)-translocating nadh-quinone reductase subunit c | BST98_RS10930 | Not Available | Negative | 2331716 - 2332510 | 28740.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | BST98_RS10935 | Not Available | Negative | 2332500 - 2333744 | 45409.9 |
| na(+)-translocating nadh-quinone reductase subunit a | BST98_RS10940 | Not Available | Negative | 2333748 - 2335088 | 48534.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

