Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | BST98_RS10845 | Not Available | Negative | 2314726 - 2315004 | 10771.0 |
| arsc family reductase | BST98_RS10850 | Not Available | Positive | 2315338 - 2315697 | 13772.6 |
| succinyl-diaminopimelate desuccinylase | BST98_RS10855 | Not Available | Positive | 2315708 - 2316841 | 41007.8 |
| duf2897 family protein | BST98_RS10860 | Not Available | Positive | 2316921 - 2317127 | 7946.59 |
| glutamate-5-semialdehyde dehydrogenase | BST98_RS10865 | Not Available | Negative | 2317176 - 2318474 | 46695.1 |
| glutamate 5-kinase | BST98_RS10870 | Not Available | Negative | 2318525 - 2319673 | 40844.6 |
| sigma factor-binding protein crl | BST98_RS10875 | Not Available | Negative | 2319891 - 2320286 | 15441.1 |
| esterase frsa | BST98_RS10880 | Not Available | Negative | 2320449 - 2321711 | 47100.7 |
| xanthine phosphoribosyltransferase | BST98_RS10885 | Not Available | Negative | 2321969 - 2322427 | 17169.7 |
| ncs2 family permease | BST98_RS10890 | Not Available | Negative | 2322504 - 2323793 | 44888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

