Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1499 domain-containing protein | BST98_RS10795 | Not Available | Positive | 2306640 - 2307086 | 16902.2 |
| hypothetical protein | BST98_RS10800 | Not Available | Positive | 2307196 - 2307417 | 8543.56 |
| tigr02808 family protein | BST98_RS10805 | Not Available | Negative | 2307466 - 2307603 | 4890.16 |
| napc/nirt family cytochrome c | BST98_RS10810 | Not Available | Negative | 2307618 - 2308193 | 21777.1 |
| nitrate reductase cytochrome c-type subunit | BST98_RS10815 | Not Available | Negative | 2308208 - 2308723 | 18740.5 |
| periplasmic nitrate reductase subunit alpha | BST98_RS10820 | Not Available | Negative | 2308795 - 2311281 | 93333.4 |
| chaperone napd | BST98_RS10825 | Not Available | Negative | 2311278 - 2311550 | 10218.0 |
| ferredoxin-type protein napf | BST98_RS10830 | Not Available | Negative | 2311553 - 2312047 | 18215.6 |
| nitrate/nitrite two-component system sensor histidine kinase narq | BST98_RS10835 | Not Available | Positive | 2312319 - 2314025 | 64444.8 |
| response regulator | BST98_RS10840 | Not Available | Positive | 2314018 - 2314644 | 22651.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

