Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zipa | BST98_RS10745 | Not Available | Negative | 2296848 - 2298065 | 44247.8 |
| sulfate transporter cysz | BST98_RS10750 | Not Available | Positive | 2298396 - 2299154 | 28880.9 |
| cysteine synthase a | BST98_RS10755 | Not Available | Positive | 2299402 - 2300370 | 34293.1 |
| hpr family phosphocarrier protein | BST98_RS10760 | Not Available | Positive | 2300688 - 2300975 | 10129.2 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | BST98_RS10765 | Not Available | Positive | 2301031 - 2302758 | 63732.6 |
| pts glucose transporter subunit iia | BST98_RS10770 | Not Available | Positive | 2302799 - 2303308 | 18096.8 |
| dyp-type peroxidase | BST98_RS10775 | Not Available | Negative | 2303442 - 2304338 | 33406.6 |
| hypothetical protein | BST98_RS10780 | Not Available | Negative | 2304949 - 2305350 | 14760.5 |
| duf2919 domain-containing protein | BST98_RS10785 | Not Available | Negative | 2305356 - 2305817 | 17554.9 |
| duf2956 domain-containing protein | BST98_RS10790 | Not Available | Positive | 2306292 - 2306627 | 12980.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

