Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpp20 family lipoprotein | BST98_RS10690 | Not Available | Negative | 2287041 - 2287502 | 16580.6 |
| flgo family outer membrane protein | BST98_RS10695 | Not Available | Negative | 2287509 - 2288144 | 23604.4 |
| flagellar assembly protein flgt | BST98_RS10700 | Not Available | Positive | 2288303 - 2289448 | 42707.9 |
| Trna-arg | Not Available | Not Available | Positive | 2289508 - 2289584 | Not Available |
| la_2272 family surface repeat-containing protein | BST98_RS10710 | Not Available | Positive | 2289829 - 2290365 | 18668.4 |
| Trna-ala | Not Available | Not Available | Positive | 2290500 - 2290575 | Not Available |
| glutamate--trna ligase | BST98_RS10720 | Not Available | Negative | 2290737 - 2292161 | 53509.7 |
| hypothetical protein | BST98_RS10725 | Not Available | Negative | 2292349 - 2292540 | 6537.88 |
| hypothetical protein | BST98_RS10730 | Not Available | Negative | 2292684 - 2294096 | 51569.1 |
| nad-dependent dna ligase liga | BST98_RS10740 | Not Available | Negative | 2294679 - 2296694 | 74565.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

