Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgf | BST98_RS10640 | Not Available | Negative | 2279348 - 2280097 | 27075.3 |
| flagellar hook protein flge | BST98_RS10645 | Not Available | Negative | 2280354 - 2281703 | 48525.9 |
| flagellar hook assembly protein flgd | BST98_RS10650 | Not Available | Negative | 2281703 - 2282434 | 25949.6 |
| flagellar basal body rod protein flgc | BST98_RS10655 | Not Available | Negative | 2282458 - 2282877 | 15133.8 |
| flagellar basal body rod protein flgb | BST98_RS10660 | Not Available | Negative | 2282881 - 2283288 | 14340.9 |
| cher family methyltransferase | BST98_RS10665 | Not Available | Negative | 2283416 - 2284240 | 30926.8 |
| chemotaxis protein chev | BST98_RS10670 | Not Available | Negative | 2284409 - 2285332 | 34082.3 |
| flagellar basal body p-ring formation chaperone flga | BST98_RS10675 | Not Available | Positive | 2285425 - 2286120 | 25286.6 |
| flagellar biosynthesis anti-sigma factor flgm | BST98_RS10680 | Not Available | Positive | 2286244 - 2286555 | 11267.1 |
| flagella synthesis protein flgn | BST98_RS10685 | Not Available | Positive | 2286585 - 2287010 | 16035.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

