Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar filament capping protein flid | BST98_RS10590 | Not Available | Negative | 2267390 - 2268778 | 50412.0 |
| flagellin lysine-n-methylase | BST98_RS10595 | Not Available | Negative | 2268824 - 2270014 | 45826.2 |
| flagellin | BST98_RS10600 | Not Available | Negative | 2270159 - 2271598 | 49146.0 |
| flagellar hook-associated protein flgl | BST98_RS10605 | Not Available | Negative | 2271862 - 2273100 | 45052.3 |
| flagellar hook-associated protein flgk | BST98_RS10610 | Not Available | Negative | 2273114 - 2275102 | 71118.4 |
| flagellar hook protein | BST98_RS10615 | Not Available | Positive | 2275356 - 2275544 | 6792.14 |
| flagellar assembly peptidoglycan hydrolase flgj | BST98_RS10620 | Not Available | Negative | 2275602 - 2276600 | 36963.5 |
| flagellar basal body p-ring protein flgi | BST98_RS10625 | Not Available | Negative | 2276619 - 2277704 | 37936.6 |
| flagellar basal body l-ring protein flgh | BST98_RS10630 | Not Available | Negative | 2277752 - 2278531 | 28066.7 |
| flagellar basal-body rod protein flgg | BST98_RS10635 | Not Available | Negative | 2278543 - 2279331 | 27942.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

