Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein export atpase flii | BST98_RS10535 | Not Available | Negative | 2256765 - 2258078 | 46552.7 |
| flagellar assembly protein flih | BST98_RS10540 | Not Available | Negative | 2258075 - 2258890 | 30560.3 |
| flagellar motor switch protein flig | BST98_RS10545 | Not Available | Negative | 2258902 - 2259942 | 38355.9 |
| flagellar basal-body ms-ring/collar protein flif | BST98_RS10550 | Not Available | Negative | 2259932 - 2261620 | 61827.2 |
| flagellar hook-basal body complex protein flie | BST98_RS10555 | Not Available | Negative | 2261716 - 2262027 | 11194.3 |
| sigma-54-dependent transcriptional regulator | BST98_RS10560 | Not Available | Negative | 2262135 - 2263595 | 54044.4 |
| sensor histidine kinase | BST98_RS10565 | Not Available | Negative | 2263599 - 2264612 | 36841.1 |
| sigma-54 dependent transcriptional regulator | BST98_RS10575 | Not Available | Negative | 2264934 - 2266379 | 54108.3 |
| flagellar export chaperone flis | BST98_RS10580 | Not Available | Negative | 2266671 - 2267066 | 14654.7 |
| flagellar biosynthesis protein flis | BST98_RS10585 | Not Available | Negative | 2267076 - 2267375 | 11757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

