Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flhb | BST98_RS10485 | Not Available | Negative | 2248870 - 2250000 | 42087.5 |
| flagellar biosynthetic protein flir | BST98_RS10490 | Not Available | Negative | 2250072 - 2250854 | 29052.6 |
| flagellar biosynthesis protein fliq | BST98_RS10495 | Not Available | Negative | 2250867 - 2251136 | 10096.0 |
| atpase | BST98_RS10500 | Not Available | Negative | 2251133 - 2251879 | 26875.8 |
| flagellar biosynthetic protein flio | BST98_RS10505 | Not Available | Negative | 2251938 - 2252276 | 12336.2 |
| flagellar motor switch protein flin | BST98_RS10510 | Not Available | Negative | 2252276 - 2252662 | 14138.8 |
| flagellar motor switch protein flim | BST98_RS10515 | Not Available | Negative | 2252677 - 2253720 | 39277.4 |
| flagellar basal body-associated protein flil | BST98_RS10520 | Not Available | Negative | 2253728 - 2254192 | 17106.8 |
| flagellar hook-length control protein flik | BST98_RS10525 | Not Available | Negative | 2254227 - 2256029 | 64461.6 |
| flagellar export protein flij | BST98_RS10530 | Not Available | Negative | 2256218 - 2256670 | 17995.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

