Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | BST98_RS10435 | Not Available | Negative | 2236565 - 2237692 | 42392.4 |
| para family protein | BST98_RS10440 | Not Available | Negative | 2237682 - 2238458 | 28955.5 |
| protein-glutamate methylesterase/protein-glutamine glutaminase | BST98_RS10445 | Not Available | Negative | 2238470 - 2239723 | 44882.7 |
| chemotaxis protein chea | BST98_RS10450 | Not Available | Negative | 2239798 - 2242101 | 83105.3 |
| protein phosphatase chez | BST98_RS10455 | Not Available | Negative | 2242111 - 2242833 | 27250.6 |
| chemotaxis response regulator chey | BST98_RS10460 | Not Available | Negative | 2242870 - 2243241 | 14003.2 |
| rna polymerase sigma factor flia | BST98_RS10465 | Not Available | Negative | 2243297 - 2244019 | 27145.4 |
| mind/para family protein | BST98_RS10470 | Not Available | Negative | 2244012 - 2244899 | 32094.2 |
| flagellar biosynthesis protein flhf | BST98_RS10475 | Not Available | Negative | 2244892 - 2246478 | 59532.6 |
| flagellar biosynthesis protein flha | BST98_RS10480 | Not Available | Negative | 2246518 - 2248623 | 75971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

