Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein | BST98_RS10385 | Not Available | Negative | 2229224 - 2229748 | 19683.7 |
| dsbe family thiol:disulfide interchange protein | BST98_RS10390 | Not Available | Negative | 2229745 - 2230299 | 20918.4 |
| heme lyase ccmf/nrfe family subunit | BST98_RS10395 | Not Available | Negative | 2230311 - 2232272 | 72350.4 |
| cytochrome c maturation protein ccme | BST98_RS10400 | Not Available | Negative | 2232276 - 2232755 | 17589.5 |
| heme exporter protein ccmd | BST98_RS10405 | Not Available | Negative | 2232752 - 2232958 | 7850.78 |
| heme abc transporter permease | BST98_RS10410 | Not Available | Negative | 2232966 - 2233697 | 27627.2 |
| heme exporter protein ccmb | BST98_RS10415 | Not Available | Negative | 2233923 - 2234591 | 23818.5 |
| cytochrome c biogenesis heme-transporting atpase ccma | BST98_RS10420 | Not Available | Negative | 2234594 - 2235244 | 24181.0 |
| duf2802 domain-containing protein | BST98_RS10425 | Not Available | Negative | 2235618 - 2236052 | 16633.3 |
| chemotaxis protein chew | BST98_RS10430 | Not Available | Negative | 2236052 - 2236546 | 18361.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

