Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohistidine phosphatase sixa | BST98_RS10335 | Not Available | Negative | 2213870 - 2214343 | 17729.9 |
| insulinase family protein | BST98_RS10340 | Not Available | Positive | 2214782 - 2217547 | 105936.0 |
| fatty acid oxidation complex subunit alpha fadj | BST98_RS10345 | Not Available | Negative | 2218091 - 2220211 | 77285.6 |
| acetyl-coa c-acyltransferase fadi | BST98_RS10350 | Not Available | Negative | 2220211 - 2221521 | 46502.1 |
| sigma-70 family rna polymerase sigma factor | BST98_RS10355 | Not Available | Positive | 2222171 - 2222740 | 22345.5 |
| duf3379 family protein | BST98_RS10360 | Not Available | Positive | 2222727 - 2223440 | 26131.3 |
| outer membrane protein transport protein | BST98_RS10365 | Not Available | Positive | 2223830 - 2225071 | 45002.7 |
| outer membrane protein transport protein | BST98_RS10370 | Not Available | Positive | 2225437 - 2226771 | 47521.6 |
| mlaa family lipoprotein | BST98_RS10375 | Not Available | Negative | 2226861 - 2227664 | 29902.0 |
| c-type cytochrome biogenesis protein ccmi | BST98_RS10380 | Not Available | Negative | 2227947 - 2229227 | 47486.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

