Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS10285 | Not Available | Negative | 2206069 - 2206806 | 26078.2 |
| mgmt family protein | BST98_RS10290 | Not Available | Positive | 2206918 - 2207223 | 11532.7 |
| ybay family lipoprotein | BST98_RS10295 | Not Available | Negative | 2207287 - 2207709 | 15287.3 |
| acyl-coa thioesterase ii | BST98_RS10300 | Not Available | Positive | 2207844 - 2208710 | 32705.2 |
| lrp/asnc family transcriptional regulator | BST98_RS10305 | Not Available | Negative | 2208855 - 2209316 | 17592.3 |
| plp-dependent cysteine synthase family protein | BST98_RS10310 | Not Available | Positive | 2209567 - 2210655 | 40680.1 |
| 7-cyano-7-deazaguanine synthase quec | BST98_RS10315 | Not Available | Positive | 2211044 - 2211748 | 25856.8 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | BST98_RS10320 | Not Available | Negative | 2211871 - 2212803 | 35506.2 |
| endonuclease smrb | BST98_RS10325 | Not Available | Positive | 2212857 - 2213387 | 20021.2 |
| hypothetical protein | BST98_RS10330 | Not Available | Negative | 2213482 - 2213844 | 13065.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

