Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BST98_RS10230 | Not Available | Negative | 2195632 - 2197167 | 56463.9 |
| hlyd family secretion protein | BST98_RS10235 | Not Available | Negative | 2197179 - 2198186 | 36775.4 |
| winged helix-turn-helix domain-containing protein | BST98_RS10240 | Not Available | Positive | 2198485 - 2199897 | 53140.9 |
| hypothetical protein | BST98_RS10245 | Not Available | Positive | 2200084 - 2200560 | 18015.4 |
| acfa family outer membrane beta-barrel protein | BST98_RS10250 | Not Available | Negative | 2200659 - 2201297 | 23802.5 |
| 2tm domain-containing protein | BST98_RS10255 | Not Available | Negative | 2201450 - 2201917 | 17960.9 |
| hypothetical protein | BST98_RS10260 | Not Available | Negative | 2202481 - 2203218 | 28165.8 |
| hypothetical protein | BST98_RS10265 | Not Available | Negative | 2203211 - 2204050 | 31349.6 |
| nerd domain-containing protein | BST98_RS10270 | Not Available | Negative | 2204594 - 2205367 | 29672.2 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 2205834 - 2205930 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

