Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | BST98_RS10190 | Not Available | Negative | 2187373 - 2188416 | 37180.8 |
| hypothetical protein | BST98_RS22595 | Not Available | Positive | 2188936 - 2189058 | 4565.67 |
| beta/gamma crystallin-related protein | BST98_RS10195 | Not Available | Positive | 2189223 - 2189789 | 20862.4 |
| hypothetical protein | BST98_RS22310 | Not Available | Negative | 2189900 - 2190055 | 5663.91 |
| lysr family transcriptional regulator | BST98_RS10200 | Not Available | Positive | 2190257 - 2191195 | 34849.1 |
| oxygen-insensitive nad(p)h nitroreductase | BST98_RS10205 | Not Available | Negative | 2191271 - 2191924 | 24253.8 |
| fusc family protein | BST98_RS10210 | Not Available | Positive | 2192338 - 2193375 | 38879.7 |
| hoxn/hupn/nixa family nickel/cobalt transporter | BST98_RS10215 | Not Available | Positive | 2193562 - 2194590 | 37732.9 |
| nitrogenase-stabilizing/protective protein nifw | BST98_RS10220 | Not Available | Negative | 2194611 - 2194886 | 10860.0 |
| tetr/acrr family transcriptional regulator | BST98_RS10225 | Not Available | Positive | 2195030 - 2195635 | 22518.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

