Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | BST98_RS10090 | Not Available | Negative | 2162709 - 2163038 | 12015.6 |
| dna polymerase iii subunit gamma/tau | BST98_RS10095 | Not Available | Negative | 2163163 - 2165289 | 77825.5 |
| adenine phosphoribosyltransferase | BST98_RS10100 | Not Available | Negative | 2165538 - 2166083 | 19747.9 |
| yban family protein | BST98_RS10105 | Not Available | Negative | 2166255 - 2166653 | 14860.0 |
| trar/dksa c4-type zinc finger protein | BST98_RS10110 | Not Available | Positive | 2166983 - 2167348 | 13752.3 |
| duf2057 domain-containing protein | BST98_RS10115 | Not Available | Negative | 2167440 - 2168081 | 23609.0 |
| porin | BST98_RS10120 | Not Available | Negative | 2168223 - 2169227 | 36763.4 |
| atp-dependent dna helicase ding | BST98_RS10125 | Not Available | Positive | 2169760 - 2171835 | 78149.8 |
| sulfite exporter taue/safe family protein | BST98_RS10130 | Not Available | Positive | 2171871 - 2172644 | 27460.3 |
| primosomal replication protein pric | BST98_RS10135 | Not Available | Positive | 2172656 - 2173207 | 21706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

