Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator nagc | BST98_RS10040 | Not Available | Positive | 2149729 - 2150943 | 44043.3 |
| cation:proton antiporter family protein | BST98_RS10045 | Not Available | Positive | 2151233 - 2152822 | 57731.6 |
| asparagine synthase b | BST98_RS10050 | Not Available | Positive | 2153185 - 2154855 | 62665.5 |
| inosine/guanosine kinase | BST98_RS10055 | Not Available | Negative | 2154933 - 2156237 | 48919.9 |
| ferrochelatase | BST98_RS10060 | Not Available | Negative | 2156410 - 2157384 | 36677.0 |
| adenylate kinase | BST98_RS10065 | Not Available | Negative | 2157670 - 2158314 | 23116.7 |
| molecular chaperone htpg | BST98_RS10070 | Not Available | Negative | 2158451 - 2160352 | 72201.9 |
| winged helix-turn-helix domain-containing protein | BST98_RS10075 | Not Available | Positive | 2160542 - 2161444 | 33423.6 |
| regulatory protein toxs | BST98_RS10080 | Not Available | Positive | 2161489 - 2161998 | 19938.1 |
| recombination mediator recr | BST98_RS10085 | Not Available | Negative | 2162103 - 2162705 | 21663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

