Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase tusa | BST98_RS00055 | Not Available | Negative | 12797 - 13048 | 9316.26 |
| hypothetical protein | BST98_RS00060 | Not Available | Positive | 13191 - 13376 | 6932.33 |
| lysr family transcriptional regulator | BST98_RS00065 | Not Available | Positive | 13456 - 14400 | 35722.6 |
| mdr family oxidoreductase | BST98_RS00070 | Not Available | Negative | 14485 - 15465 | 34881.4 |
| acetyl-coa c-acyltransferase fada | BST98_RS00075 | Not Available | Negative | 15667 - 16830 | 41254.1 |
| fatty acid oxidation complex subunit alpha fadb | BST98_RS00080 | Not Available | Negative | 16841 - 19021 | 79423.8 |
| yigz family protein | BST98_RS00085 | Not Available | Positive | 19230 - 19847 | 22303.5 |
| trkh family potassium uptake protein | BST98_RS00090 | Not Available | Positive | 19885 - 21342 | 53243.1 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | BST98_RS00095 | Not Available | Positive | 21352 - 21885 | 20474.8 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 22324 - 23875 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

