Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | BST98_RS09990 | Not Available | Positive | 2138054 - 2138815 | 28832.6 |
| duf2788 domain-containing protein | BST98_RS09995 | Not Available | Positive | 2138902 - 2139123 | 8115.29 |
| flavodoxin flda | BST98_RS10000 | Not Available | Positive | 2139279 - 2139806 | 19721.0 |
| duf4442 domain-containing protein | BST98_RS10005 | Not Available | Negative | 2139922 - 2140383 | 17657.4 |
| ferric iron uptake transcriptional regulator | BST98_RS10010 | Not Available | Positive | 2140576 - 2141022 | 16850.0 |
| glutamine--trna ligase | BST98_RS10015 | Not Available | Negative | 2141309 - 2142976 | 63580.2 |
| beta-n-acetylhexosaminidase | BST98_RS10020 | Not Available | Negative | 2143210 - 2145873 | 98008.3 |
| n-acetylglucosamine-specific pts transporter subunit iibc | BST98_RS10025 | Not Available | Negative | 2146045 - 2147514 | 51736.9 |
| glucosamine-6-phosphate deaminase | BST98_RS10030 | Not Available | Positive | 2147771 - 2148571 | 29980.6 |
| n-acetylglucosamine-6-phosphate deacetylase | BST98_RS10035 | Not Available | Positive | 2148589 - 2149725 | 40883.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

