Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slp family lipoprotein | BST98_RS09840 | Not Available | Negative | 2106111 - 2106668 | 20844.2 |
| hypothetical protein | BST98_RS09845 | Not Available | Negative | 2106811 - 2107101 | 10325.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | BST98_RS09850 | Not Available | Negative | 2107161 - 2107862 | 25127.1 |
| atp-dependent dna helicase | BST98_RS09855 | Not Available | Negative | 2107863 - 2109821 | 72291.8 |
| formyltetrahydrofolate deformylase | BST98_RS09860 | Not Available | Positive | 2110075 - 2110914 | 31584.9 |
| voc family protein | BST98_RS09865 | Not Available | Negative | 2111004 - 2111588 | 22024.3 |
| arginine--trna ligase | BST98_RS09870 | Not Available | Positive | 2112003 - 2113733 | 64608.0 |
| duf924 family protein | BST98_RS09875 | Not Available | Negative | 2113844 - 2114449 | 23378.8 |
| hit domain-containing protein | BST98_RS09880 | Not Available | Positive | 2114611 - 2115045 | 16175.5 |
| feoc-like transcriptional regulator | BST98_RS09885 | Not Available | Negative | 2115124 - 2115366 | 9186.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

