Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhac family protein | BST98_RS09790 | Not Available | Negative | 2095750 - 2097345 | 56617.8 |
| h-ns family nucleoid-associated regulatory protein | BST98_RS09795 | Not Available | Positive | 2098007 - 2098402 | 14941.7 |
| lytic transglycosylase domain-containing protein | BST98_RS09800 | Not Available | Negative | 2098695 - 2099666 | 36481.3 |
| ycgl domain-containing protein | BST98_RS09805 | Not Available | Negative | 2099677 - 2099955 | 10233.7 |
| septum site-determining protein minc | BST98_RS09810 | Not Available | Positive | 2100162 - 2100824 | 23625.5 |
| septum site-determining protein mind | BST98_RS09815 | Not Available | Positive | 2100847 - 2101659 | 29470.4 |
| cell division topological specificity factor mine | BST98_RS09820 | Not Available | Positive | 2101665 - 2101928 | 9835.93 |
| ribonuclease d | BST98_RS09825 | Not Available | Negative | 2102015 - 2103163 | 43659.4 |
| long-chain-fatty-acid--coa ligase fadd | BST98_RS09830 | Not Available | Negative | 2103329 - 2105023 | 63165.7 |
| alpha/beta fold hydrolase | BST98_RS09835 | Not Available | Negative | 2105202 - 2106104 | 34178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

