Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | BST98_RS00910 | Not Available | Positive | 183006 - 183218 | 7760.22 |
| sodium:proton antiporter | BST98_RS00915 | Not Available | Positive | 183924 - 185102 | 43846.1 |
| met regulon transcriptional regulator metj | BST98_RS00920 | Not Available | Negative | 185252 - 185569 | 12073.2 |
| o-succinylhomoserine (thiol)-lyase | BST98_RS00925 | Not Available | Positive | 185857 - 187020 | 41646.6 |
| padr family transcriptional regulator | BST98_RS00930 | Not Available | Negative | 187097 - 187663 | 21875.9 |
| phosphoenolpyruvate carboxylase | BST98_RS00935 | Not Available | Negative | 188032 - 190662 | 98415.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BST98_RS00940 | Not Available | Positive | 191247 - 192260 | 36310.6 |
| acetylglutamate kinase | BST98_RS00945 | Not Available | Positive | 192270 - 193052 | 26857.0 |
| argininosuccinate synthase | BST98_RS00950 | Not Available | Positive | 193130 - 194341 | 44320.4 |
| argininosuccinate lyase | BST98_RS00955 | Not Available | Positive | 194444 - 196321 | 69490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

