Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| his-xaa-ser system radical sam maturase hxsc | BST98_RS09440 | Not Available | Positive | 2021960 - 2023126 | 43657.1 |
| hypothetical protein | BST98_RS09445 | Not Available | Positive | 2023129 - 2023422 | 10208.1 |
| leukocidin family pore-forming toxin | BST98_RS09450 | Not Available | Negative | 2023572 - 2025383 | 68236.7 |
| Trna-ser | Not Available | Not Available | Positive | 2026134 - 2026224 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2026250 - 2026337 | Not Available |
| miniconductance mechanosensitive channel mscm | BST98_RS09465 | Not Available | Positive | 2026584 - 2029892 | 126445.0 |
| class i poly(r)-hydroxyalkanoic acid synthase | BST98_RS09470 | Not Available | Negative | 2029981 - 2031753 | 67432.2 |
| phasin family protein | BST98_RS09475 | Not Available | Negative | 2031813 - 2032160 | 13185.8 |
| acetyl-coa c-acetyltransferase | BST98_RS09480 | Not Available | Negative | 2032205 - 2033410 | 41486.1 |
| sdr family oxidoreductase | BST98_RS09485 | Not Available | Negative | 2033424 - 2034164 | 26340.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

