Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator ebgr | BST98_RS09385 | Not Available | Positive | 2010083 - 2011069 | 36870.2 |
| beta-galactosidase subunit alpha | BST98_RS09390 | Not Available | Positive | 2011379 - 2014480 | 118539.0 |
| beta-galactosidase subunit beta | BST98_RS09395 | Not Available | Positive | 2014485 - 2014937 | 17623.7 |
| amino acid permease | BST98_RS09400 | Not Available | Positive | 2015045 - 2016487 | 52552.8 |
| amino acid permease | BST98_RS09405 | Not Available | Positive | 2016647 - 2018074 | 52113.4 |
| hypothetical protein | BST98_RS09410 | Not Available | Negative | 2018182 - 2018577 | 15079.0 |
| dna-binding protein | BST98_RS09415 | Not Available | Negative | 2018559 - 2018972 | 15735.8 |
| his-xaa-ser system protein hxsd | BST98_RS09425 | Not Available | Positive | 2019845 - 2020261 | 15643.8 |
| hypothetical protein | BST98_RS09430 | Not Available | Positive | 2020265 - 2020498 | 9028.12 |
| his-xaa-ser system radical sam maturase hxsb | BST98_RS09435 | Not Available | Positive | 2020500 - 2021960 | 55115.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

