Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS09335 | Not Available | Negative | 1999412 - 1999618 | 8240.34 |
| tigr01621 family pseudouridine synthase | BST98_RS09340 | Not Available | Negative | 1999816 - 2000499 | 25370.4 |
| sodium-dependent transporter | BST98_RS09345 | Not Available | Negative | 2000650 - 2001984 | 48491.6 |
| cardiolipin synthase | BST98_RS09350 | Not Available | Positive | 2002498 - 2003961 | 55472.7 |
| oxidoreductase | BST98_RS09355 | Not Available | Positive | 2004151 - 2004642 | 19146.3 |
| ggdef domain-containing protein | BST98_RS09360 | Not Available | Positive | 2004642 - 2005766 | 43379.0 |
| hypothetical protein | BST98_RS09365 | Not Available | Positive | 2005818 - 2006015 | 8016.52 |
| l-threonine dehydrogenase | BST98_RS09370 | Not Available | Negative | 2006114 - 2007262 | 40292.7 |
| methyl-accepting chemotaxis protein | BST98_RS09375 | Not Available | Positive | 2007686 - 2009311 | 58810.4 |
| pp_01701 | BST98_RS09380 | Not Available | Negative | 2009415 - 2009747 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

