Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate/anthranilate synthase component ii | BST98_RS09285 | Not Available | Positive | 1991243 - 1991872 | 22668.2 |
| anthranilate phosphoribosyltransferase | BST98_RS09290 | Not Available | Positive | 1991877 - 1992884 | 35594.8 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | BST98_RS09295 | Not Available | Positive | 1992894 - 1994303 | 52328.7 |
| tryptophan synthase subunit beta | BST98_RS09300 | Not Available | Positive | 1994296 - 1995486 | 42601.2 |
| tryptophan synthase subunit alpha | BST98_RS09305 | Not Available | Positive | 1995486 - 1996298 | 28649.5 |
| septation protein a | BST98_RS09310 | Not Available | Positive | 1996413 - 1996952 | 20608.3 |
| acyl-coa thioester hydrolase ycia | BST98_RS09315 | Not Available | Positive | 1996965 - 1997363 | 14188.2 |
| ycii family protein | BST98_RS09320 | Not Available | Positive | 1997497 - 1997796 | 11053.1 |
| type ii secretion system pilot lipoprotein gsps-beta | BST98_RS09325 | Not Available | Positive | 1997814 - 1998200 | 13641.5 |
| class i sam-dependent methyltransferase | BST98_RS09330 | Not Available | Negative | 1998348 - 1999286 | 35122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

