Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | BST98_RS09035 | Not Available | Positive | 1917321 - 1918244 | 32656.8 |
| acetolactate synthase alss | BST98_RS09040 | Not Available | Positive | 1918671 - 1920335 | 60065.8 |
| acetolactate decarboxylase | BST98_RS09045 | Not Available | Positive | 1920358 - 1921065 | 26254.3 |
| ynce family protein | BST98_RS09050 | Not Available | Negative | 1921143 - 1924115 | 112722.0 |
| glycosyl hydrolase family 18 protein | BST98_RS09055 | Not Available | Positive | 1924834 - 1928352 | 127924.0 |
| arsr/smtb family transcription factor | BST98_RS09060 | Not Available | Negative | 1928463 - 1928756 | 10508.7 |
| permease | BST98_RS09065 | Not Available | Positive | 1928944 - 1930023 | 38766.0 |
| rida family protein | BST98_RS09070 | Not Available | Negative | 1930082 - 1930555 | 17136.7 |
| nramp family divalent metal transporter | BST98_RS09075 | Not Available | Positive | 1930854 - 1932086 | 43234.3 |
| sulp family inorganic anion transporter | BST98_RS09080 | Not Available | Negative | 1932207 - 1933928 | 61853.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

