Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase glpk | BST98_RS00860 | Not Available | Negative | 171228 - 172739 | 55101.5 |
| mip/aquaporin family protein | BST98_RS00865 | Not Available | Negative | 172842 - 173693 | 29591.3 |
| cell division protein zapb | BST98_RS00870 | Not Available | Positive | 174321 - 174563 | 9245.02 |
| ribonuclease e activity regulator rraa | BST98_RS00875 | Not Available | Negative | 174650 - 175135 | 17336.3 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | BST98_RS00880 | Not Available | Negative | 175260 - 176174 | 32277.1 |
| hslu--hslv peptidase atpase subunit | BST98_RS00885 | Not Available | Negative | 176315 - 177646 | 49925.9 |
| atp-dependent protease subunit hslv | BST98_RS00890 | Not Available | Negative | 177657 - 178184 | 19087.9 |
| cell division protein ftsn | BST98_RS00895 | Not Available | Negative | 178324 - 179187 | 31983.2 |
| atpase | BST98_RS00900 | Not Available | Negative | 179354 - 180361 | 36596.3 |
| primosomal protein n' | BST98_RS00905 | Not Available | Negative | 180560 - 182764 | 81997.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

