Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS08985 | Not Available | Positive | 1907730 - 1908026 | 11613.9 |
| dmt family transporter | BST98_RS08990 | Not Available | Positive | 1908386 - 1909288 | 33111.4 |
| apc family permease | BST98_RS08995 | Not Available | Positive | 1909556 - 1910950 | 50751.1 |
| dmt family transporter | BST98_RS09000 | Not Available | Negative | 1911035 - 1911388 | 12478.0 |
| riboflavin synthase subunit alpha | BST98_RS09005 | Not Available | Positive | 1911721 - 1912281 | 21017.2 |
| glycosyltransferase family 2 protein | BST98_RS09010 | Not Available | Positive | 1912274 - 1913254 | 37191.9 |
| gtra family protein | BST98_RS09015 | Not Available | Positive | 1913247 - 1913627 | 14411.9 |
| hypothetical protein | BST98_RS09020 | Not Available | Positive | 1913624 - 1914778 | 44153.6 |
| pfkb family carbohydrate kinase | BST98_RS09025 | Not Available | Positive | 1914979 - 1916199 | 45067.0 |
| grp family sugar transporter | BST98_RS09030 | Not Available | Positive | 1916300 - 1917301 | 35382.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

