Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | BST98_RS08785 | Not Available | Positive | 1868431 - 1869525 | 42403.0 |
| eal domain-containing protein | BST98_RS08790 | Not Available | Positive | 1869522 - 1871588 | 78911.3 |
| nupc/nupg family nucleoside cnt transporter | BST98_RS08795 | Not Available | Positive | 1871887 - 1873086 | 43665.6 |
| enoyl-coa hydratase/isomerase family protein | BST98_RS08800 | Not Available | Positive | 1873279 - 1874037 | 28497.4 |
| amino acid aminotransferase | BST98_RS08805 | Not Available | Positive | 1874181 - 1875371 | 43495.0 |
| hypothetical protein | BST98_RS08810 | Not Available | Negative | 1875422 - 1875727 | 12120.5 |
| hypothetical protein | BST98_RS08815 | Not Available | Negative | 1875926 - 1876330 | 14410.6 |
| duf2982 domain-containing protein | BST98_RS08820 | Not Available | Positive | 1876632 - 1877291 | 25135.8 |
| rna polymerase sigma factor rpod/siga | BST98_RS08825 | Not Available | Negative | 1877288 - 1878136 | 32434.0 |
| mfs transporter | BST98_RS08830 | Not Available | Negative | 1878389 - 1879720 | 49610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

