Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate permease | BST98_RS08735 | Not Available | Positive | 1856895 - 1858478 | 56222.8 |
| (fe-s)-binding protein | BST98_RS08740 | Not Available | Positive | 1858660 - 1859379 | 26271.1 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | BST98_RS08745 | Not Available | Positive | 1859391 - 1860806 | 52546.1 |
| lutc/ykgg family protein | BST98_RS08750 | Not Available | Positive | 1860821 - 1861570 | 27369.4 |
| lysr family transcriptional regulator | BST98_RS08755 | Not Available | Positive | 1861793 - 1862695 | 33453.2 |
| rok family protein | BST98_RS08760 | Not Available | Negative | 1862778 - 1863992 | 44289.8 |
| 7-carboxy-7-deazaguanine synthase quee | BST98_RS08765 | Not Available | Positive | 1864222 - 1864890 | 24580.5 |
| asparagine--trna ligase | BST98_RS08770 | Not Available | Positive | 1865114 - 1866514 | 52640.4 |
| hydroxyethylthiazole kinase | BST98_RS08775 | Not Available | Positive | 1866580 - 1867386 | 28312.0 |
| thiamine phosphate synthase | BST98_RS08780 | Not Available | Positive | 1867411 - 1868022 | 22066.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

