Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS08690 | Not Available | Positive | 1847209 - 1847388 | 6601.89 |
| mfs transporter | BST98_RS08695 | Not Available | Positive | 1847388 - 1848602 | 44015.4 |
| protease htpx | BST98_RS08700 | Not Available | Negative | 1848766 - 1849647 | 31910.3 |
| hypothetical protein | BST98_RS22450 | Not Available | Positive | 1850042 - 1850209 | 6187.35 |
| dethiobiotin synthase | BST98_RS08705 | Not Available | Negative | 1850342 - 1851025 | 24965.1 |
| malonyl-acp o-methyltransferase bioc | BST98_RS08710 | Not Available | Negative | 1851018 - 1851884 | 31906.1 |
| 8-amino-7-oxononanoate synthase | BST98_RS08715 | Not Available | Negative | 1851877 - 1853070 | 43773.5 |
| biotin synthase biob | BST98_RS08720 | Not Available | Negative | 1853054 - 1854106 | 39479.6 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | BST98_RS08725 | Not Available | Positive | 1854296 - 1855567 | 47046.7 |
| lon peptidase substrate-binding domain-containing protein | BST98_RS08730 | Not Available | Positive | 1855639 - 1856205 | 21720.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

