Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | BST98_RS08335 | Not Available | Negative | 1786873 - 1787079 | 7560.99 |
| hypothetical protein | BST98_RS08340 | Not Available | Positive | 1787350 - 1787703 | 13723.2 |
| sodium/glutamate symporter | BST98_RS08345 | Not Available | Positive | 1788603 - 1789835 | 43969.8 |
| ofa family mfs transporter | BST98_RS08350 | Not Available | Positive | 1790085 - 1791314 | 43216.1 |
| amino acid abc transporter substrate-binding protein | BST98_RS08355 | Not Available | Positive | 1791468 - 1792496 | 38341.9 |
| bax inhibitor-1/ycca family protein | BST98_RS08360 | Not Available | Positive | 1792704 - 1793366 | 23548.4 |
| sulfurtransferase tuse | BST98_RS08365 | Not Available | Positive | 1793500 - 1793829 | 12493.1 |
| acylphosphatase | BST98_RS08370 | Not Available | Negative | 1793960 - 1794232 | 10020.1 |
| class i sam-dependent methyltransferase | BST98_RS08375 | Not Available | Positive | 1794424 - 1795614 | 44100.9 |
| duf2057 domain-containing protein | BST98_RS08380 | Not Available | Positive | 1795899 - 1796528 | 22898.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

