Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS08235 | Not Available | Positive | 1765518 - 1765910 | 14869.5 |
| carboxymuconolactone decarboxylase family protein | BST98_RS08240 | Not Available | Positive | 1766007 - 1766591 | 22083.6 |
| dihydrolipoyl dehydrogenase | BST98_RS08245 | Not Available | Positive | 1766613 - 1768766 | 78504.9 |
| abc transporter substrate-binding protein | BST98_RS08250 | Not Available | Positive | 1768781 - 1769998 | 45344.8 |
| abc transporter permease | BST98_RS08255 | Not Available | Positive | 1770088 - 1771764 | 63117.6 |
| atp-binding cassette domain-containing protein | BST98_RS08260 | Not Available | Positive | 1771766 - 1772398 | 23466.6 |
| cdp-alcohol phosphatidyltransferase family protein | BST98_RS08265 | Not Available | Positive | 1772486 - 1773100 | 22527.8 |
| dna-binding transcriptional activator punr | BST98_RS08270 | Not Available | Negative | 1773097 - 1773999 | 34009.1 |
| purine nucleoside transporter punc | BST98_RS08275 | Not Available | Positive | 1774106 - 1775314 | 43478.3 |
| arginine abc transporter atp-binding protein artp | BST98_RS08280 | Not Available | Positive | 1775790 - 1776518 | 26619.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

