Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 25 protein | BST98_RS00760 | Not Available | Negative | 152060 - 152809 | 29059.0 |
| o-antigen ligase family protein | BST98_RS00765 | Not Available | Negative | 152806 - 153993 | 44955.1 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | BST98_RS00770 | Not Available | Negative | 154002 - 154952 | 36368.0 |
| tetr/acrr family transcriptional regulator | BST98_RS00775 | Not Available | Positive | 155124 - 155765 | 25050.9 |
| peptidoglycan dd-metalloendopeptidase family protein | BST98_RS00780 | Not Available | Negative | 155830 - 157017 | 43702.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | BST98_RS00785 | Not Available | Negative | 157035 - 158576 | 55769.1 |
| rhodanese-like domain-containing protein | BST98_RS00790 | Not Available | Positive | 158985 - 159425 | 16121.6 |
| protein-export chaperone secb | BST98_RS00795 | Not Available | Positive | 159518 - 159985 | 17163.2 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | BST98_RS00800 | Not Available | Positive | 160009 - 161025 | 35971.2 |
| serine o-acetyltransferase | BST98_RS00805 | Not Available | Positive | 161157 - 161978 | 29323.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

