Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | BST98_RS07980 | Not Available | Negative | 1710289 - 1712445 | 80534.6 |
| 50s ribosomal protein l25 | BST98_RS07985 | Not Available | Positive | 1712762 - 1713040 | 10498.7 |
| duf1289 domain-containing protein | BST98_RS07990 | Not Available | Negative | 1713098 - 1713364 | 10589.7 |
| hypothetical protein | BST98_RS07995 | Not Available | Positive | 1713648 - 1713965 | 11740.9 |
| yqha family protein | BST98_RS08000 | Not Available | Negative | 1714014 - 1714523 | 18897.0 |
| dna polymerase ii | BST98_RS08005 | Not Available | Negative | 1714605 - 1716983 | 91619.4 |
| eal domain-containing protein | BST98_RS08010 | Not Available | Positive | 1717229 - 1718764 | 59308.6 |
| elongation factor p-like protein yeip | BST98_RS08015 | Not Available | Positive | 1718945 - 1719514 | 21094.0 |
| hi1450 family dsdna-mimic protein | BST98_RS08020 | Not Available | Positive | 1719721 - 1720047 | 12655.6 |
| multidrug efflux mfs transporter emrd | BST98_RS08025 | Not Available | Negative | 1720165 - 1721346 | 41482.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

