Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf411 domain-containing protein | BST98_RS07930 | Not Available | Positive | 1699812 - 1700258 | 16598.2 |
| hypothetical protein | BST98_RS07935 | Not Available | Negative | 1700381 - 1701364 | 38134.4 |
| duf2786 domain-containing protein | BST98_RS07940 | Not Available | Positive | 1701519 - 1702217 | 26286.7 |
| inosine/guanosine kinase | BST98_RS07945 | Not Available | Positive | 1702509 - 1703813 | 49047.3 |
| duf2913 family protein | BST98_RS07950 | Not Available | Negative | 1704031 - 1704678 | 24252.8 |
| bcr/cfla family multidrug efflux mfs transporter | BST98_RS07955 | Not Available | Negative | 1704687 - 1705877 | 42694.5 |
| 16s rrna pseudouridine(516) synthase rsua | BST98_RS07960 | Not Available | Negative | 1706108 - 1706806 | 26252.4 |
| gnat family n-acetyltransferase | BST98_RS07965 | Not Available | Positive | 1707183 - 1707677 | 18503.5 |
| hypothetical protein | BST98_RS07970 | Not Available | Negative | 1707761 - 1708258 | 18182.6 |
| dead/deah box helicase | BST98_RS07975 | Not Available | Positive | 1708441 - 1710183 | 66109.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

