Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BST98_RS07875 | Not Available | Positive | 1688587 - 1689288 | 25303.8 |
| energy-coupling factor abc transporter atp-binding protein | BST98_RS07880 | Not Available | Positive | 1689308 - 1690012 | 26419.0 |
| molybdenum cofactor guanylyltransferase moba | BST98_RS07885 | Not Available | Positive | 1689999 - 1690592 | 21887.2 |
| bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein mobb/molybdopterin molybdotransferase moea | BST98_RS07890 | Not Available | Positive | 1690579 - 1692363 | 64722.7 |
| duf3581 domain-containing protein | BST98_RS07895 | Not Available | Positive | 1693244 - 1693963 | 27068.4 |
| sensor histidine kinase | BST98_RS07900 | Not Available | Negative | 1694029 - 1695339 | 48729.2 |
| response regulator transcription factor | BST98_RS07905 | Not Available | Negative | 1695320 - 1695997 | 25394.8 |
| n-acetylglucosamine-specific pts transporter subunit iibc | BST98_RS07910 | Not Available | Negative | 1696160 - 1697527 | 48530.2 |
| phosphatase pap2 family protein | BST98_RS07915 | Not Available | Positive | 1697923 - 1698636 | 26909.4 |
| helix-turn-helix domain-containing protein | BST98_RS07920 | Not Available | Negative | 1698732 - 1699085 | 13155.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

