Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BST98_RS07675 | Not Available | Positive | 1639681 - 1640592 | 33463.1 |
| sdr family oxidoreductase | BST98_RS07680 | Not Available | Positive | 1641185 - 1643176 | 74123.1 |
| duf2505 domain-containing protein | BST98_RS07685 | Not Available | Positive | 1643187 - 1643696 | 18738.2 |
| tetr/acrr family transcriptional regulator | BST98_RS07690 | Not Available | Positive | 1643818 - 1644450 | 24704.9 |
| ph domain-containing protein | BST98_RS07695 | Not Available | Negative | 1644548 - 1645159 | 23384.5 |
| hypothetical protein | BST98_RS07700 | Not Available | Negative | 1645222 - 1645581 | 13602.3 |
| tetratricopeptide repeat protein | BST98_RS07705 | Not Available | Negative | 1645722 - 1646735 | 38489.8 |
| hypothetical protein | BST98_RS07710 | Not Available | Negative | 1646785 - 1647819 | 39254.7 |
| hypothetical protein | BST98_RS07715 | Not Available | Negative | 1647869 - 1648891 | 38745.4 |
| tetratricopeptide repeat protein | BST98_RS07720 | Not Available | Negative | 1648941 - 1649957 | 39135.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

