Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | BST98_RS07475 | Not Available | Positive | 1599450 - 1600175 | 26050.1 |
| hypothetical protein | BST98_RS07480 | Not Available | Negative | 1600315 - 1600758 | 16174.8 |
| cytochrome-c oxidase, cbb3-type subunit i | BST98_RS07485 | Not Available | Positive | 1601037 - 1602467 | 53412.7 |
| cytochrome-c oxidase, cbb3-type subunit ii | BST98_RS07490 | Not Available | Positive | 1602479 - 1603090 | 23022.6 |
| cbb3-type cytochrome oxidase subunit 3 | BST98_RS07495 | Not Available | Positive | 1603101 - 1603280 | 6892.23 |
| cytochrome-c oxidase, cbb3-type subunit iii | BST98_RS07500 | Not Available | Positive | 1603277 - 1604269 | 36074.7 |
| fixh family protein | BST98_RS07505 | Not Available | Positive | 1604365 - 1604856 | 18939.8 |
| heavy metal translocating p-type atpase | BST98_RS07510 | Not Available | Positive | 1604853 - 1607273 | 89017.4 |
| cbb3-type cytochrome oxidase assembly protein ccos | BST98_RS07515 | Not Available | Positive | 1607274 - 1607474 | 7566.88 |
| sulfite exporter taue/safe family protein | BST98_RS07520 | Not Available | Positive | 1607477 - 1608154 | 24327.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

