Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS07420 | Not Available | Negative | 1589206 - 1589463 | 9764.83 |
| hypothetical protein | BST98_RS07425 | Not Available | Negative | 1589635 - 1590072 | 16645.3 |
| winged helix-turn-helix domain-containing protein | BST98_RS07430 | Not Available | Negative | 1590062 - 1590793 | 27425.0 |
| had family hydrolase | BST98_RS07435 | Not Available | Positive | 1591009 - 1592034 | 38532.6 |
| hypothetical protein | BST98_RS07440 | Not Available | Negative | 1592205 - 1592456 | 9156.03 |
| type ii secretion system protein | BST98_RS22645 | Not Available | Positive | 1592576 - 1593115 | 19808.1 |
| nuclear transport factor 2 family protein | BST98_RS07455 | Not Available | Negative | 1593676 - 1594059 | 14927.5 |
| isncy family transposase | BST98_RS07460 | Not Available | Negative | 1594279 - 1595631 | 52745.4 |
| atp-binding protein | BST98_RS07465 | Not Available | Negative | 1596029 - 1598110 | 78417.3 |
| fist signal transduction protein | BST98_RS07470 | Not Available | Negative | 1598115 - 1599290 | 42477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

