Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BST98_RS07320 | Not Available | Negative | 1565198 - 1567003 | 67111.2 |
| gaf domain-containing protein | BST98_RS07325 | Not Available | Positive | 1567091 - 1567549 | 16718.2 |
| rna chaperone proq | BST98_RS07330 | Not Available | Positive | 1567660 - 1568292 | 23561.2 |
| carboxy terminal-processing peptidase | BST98_RS07335 | Not Available | Positive | 1568309 - 1570318 | 75271.3 |
| lipocalin family protein | BST98_RS07340 | Not Available | Positive | 1570507 - 1571169 | 25215.6 |
| nicotinate phosphoribosyltransferase | BST98_RS07345 | Not Available | Negative | 1571256 - 1572455 | 45365.6 |
| aminopeptidase n | BST98_RS07350 | Not Available | Positive | 1572756 - 1575380 | 99488.3 |
| duf2835 family protein | BST98_RS07355 | Not Available | Positive | 1575473 - 1575697 | 8679.48 |
| quinone-dependent dihydroorotate dehydrogenase | BST98_RS07360 | Not Available | Positive | 1575911 - 1576924 | 36773.6 |
| cell division protein zapc | BST98_RS07365 | Not Available | Positive | 1577114 - 1577653 | 20392.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

