Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS07205 | Not Available | Positive | 1544747 - 1545115 | 13366.2 |
| nitrous oxide-stimulated promoter family protein | BST98_RS07210 | Not Available | Negative | 1545288 - 1545716 | 16844.5 |
| hypothetical protein | BST98_RS07215 | Not Available | Positive | 1545955 - 1546248 | 11299.7 |
| thiopurine s-methyltransferase | BST98_RS07220 | Not Available | Positive | 1546561 - 1547199 | 24372.1 |
| formate-dependent phosphoribosylglycinamide formyltransferase | BST98_RS07225 | Not Available | Negative | 1547306 - 1548481 | 42614.9 |
| dmt family transporter | BST98_RS07230 | Not Available | Negative | 1548655 - 1549527 | 31855.7 |
| cytidine deaminase | BST98_RS07235 | Not Available | Negative | 1549715 - 1550602 | 31832.0 |
| cidb/lrgb family autolysis modulator | BST98_RS07240 | Not Available | Negative | 1550797 - 1551477 | 24302.9 |
| cida/lrga family protein | BST98_RS07245 | Not Available | Negative | 1551474 - 1551818 | 12444.8 |
| hypothetical protein | BST98_RS07250 | Not Available | Negative | 1551992 - 1552507 | 19698.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

