Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3802 family protein | BST98_RS07155 | Not Available | Positive | 1530853 - 1531197 | 12971.3 |
| pp_01284 | BST98_RS07160 | Not Available | Positive | 1531342 - 1532064 | Not Available |
| n-acetylglucosamine kinase | BST98_RS07165 | Not Available | Positive | 1532193 - 1533104 | 32636.1 |
| dead/deah box helicase | BST98_RS07170 | Not Available | Positive | 1533332 - 1534618 | 47839.1 |
| ggdef domain-containing protein | BST98_RS07175 | Not Available | Positive | 1534846 - 1536150 | 49775.5 |
| slc13 family permease | BST98_RS07180 | Not Available | Negative | 1536265 - 1537635 | 49001.7 |
| vancomycin high temperature exclusion protein | BST98_RS07185 | Not Available | Negative | 1538117 - 1538791 | 25607.3 |
| nad-dependent malic enzyme | BST98_RS07190 | Not Available | Negative | 1539034 - 1540722 | 62886.5 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | BST98_RS07195 | Not Available | Negative | 1541162 - 1542058 | 33540.6 |
| helicase-related protein | BST98_RS07200 | Not Available | Positive | 1542319 - 1544718 | 90244.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

