Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grea/greb family elongation factor | BST98_RS07055 | Not Available | Negative | 1504660 - 1505004 | 12946.8 |
| hypothetical protein | BST98_RS07060 | Not Available | Positive | 1505433 - 1506314 | 33575.9 |
| c4-dicarboxylate transporter dcuc | BST98_RS07065 | Not Available | Negative | 1506456 - 1507835 | 49383.8 |
| duf4041 domain-containing protein | BST98_RS07070 | Not Available | Positive | 1508423 - 1509913 | 57536.9 |
| p-loop ntpase fold protein | BST98_RS07075 | Not Available | Positive | 1510198 - 1511880 | 63476.2 |
| duf2845 domain-containing protein | BST98_RS07080 | Not Available | Negative | 1512101 - 1512526 | 16165.7 |
| glutaredoxin family protein | BST98_RS07085 | Not Available | Negative | 1513110 - 1513343 | 8937.99 |
| leucine-rich repeat-containing protein kinase family protein | BST98_RS07090 | Not Available | Negative | 1513364 - 1514575 | 44925.0 |
| terb family tellurite resistance protein | BST98_RS07095 | Not Available | Negative | 1514734 - 1515189 | 17126.5 |
| zinc transporter zntb | BST98_RS07100 | Not Available | Negative | 1515271 - 1516236 | 36634.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

