Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | BST98_RS07005 | Not Available | Negative | 1488196 - 1488693 | 18137.6 |
| nadh:flavin oxidoreductase | BST98_RS07010 | Not Available | Positive | 1489069 - 1490172 | 41463.4 |
| duf1456 family protein | BST98_RS07015 | Not Available | Positive | 1490274 - 1490753 | 18884.6 |
| fusc family membrane protein | BST98_RS07020 | Not Available | Negative | 1490920 - 1493007 | 78750.3 |
| phosphoethanolamine transferase epta | BST98_RS07025 | Not Available | Positive | 1493288 - 1494892 | 60530.4 |
| m66 family metalloprotease | BST98_RS07030 | Not Available | Positive | 1495214 - 1498054 | 104542.0 |
| lysozyme inhibitor lpri family protein | BST98_RS07035 | Not Available | Positive | 1498225 - 1498638 | 15609.7 |
| abc transporter atp-binding protein | BST98_RS07040 | Not Available | Negative | 1498722 - 1500572 | 68236.3 |
| agmatinase | BST98_RS07045 | Not Available | Negative | 1500738 - 1501661 | 33574.9 |
| catalase/peroxidase hpi | BST98_RS07050 | Not Available | Positive | 1502268 - 1504454 | 81144.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

