Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BST98_RS06905 | Not Available | Positive | 1465984 - 1466877 | 33999.0 |
| atpase | BST98_RS06910 | Not Available | Negative | 1466940 - 1467964 | 37170.3 |
| lysr substrate-binding domain-containing protein | BST98_RS06915 | Not Available | Negative | 1468091 - 1469017 | 36104.6 |
| hypothetical protein | BST98_RS06920 | Not Available | Negative | 1469049 - 1470413 | 53481.2 |
| s1 rna-binding domain-containing protein | BST98_RS06925 | Not Available | Positive | 1470799 - 1471641 | 31235.8 |
| nupc/nupg family nucleoside cnt transporter | BST98_RS06930 | Not Available | Positive | 1471979 - 1473187 | 42028.2 |
| molybdopterin-synthase adenylyltransferase moeb | BST98_RS06935 | Not Available | Negative | 1473395 - 1474153 | 27579.7 |
| molybdopterin molybdotransferase moea | BST98_RS06940 | Not Available | Negative | 1474166 - 1475401 | 44167.9 |
| gtp cyclohydrolase i fole | BST98_RS06945 | Not Available | Positive | 1475696 - 1476349 | 24454.7 |
| lysr family transcriptional regulator | BST98_RS06950 | Not Available | Positive | 1476456 - 1477376 | 34985.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

