Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp70 family protein | BST98_RS06650 | Not Available | Negative | 1400067 - 1402928 | 106363.0 |
| hsp70 family protein | BST98_RS06655 | Not Available | Negative | 1403072 - 1404907 | 66638.8 |
| duf2760 domain-containing protein | BST98_RS06660 | Not Available | Negative | 1404907 - 1405575 | 24567.9 |
| yajd family hnh nuclease | BST98_RS06665 | Not Available | Positive | 1406011 - 1406367 | 13476.7 |
| site-2 protease family protein | BST98_RS06670 | Not Available | Negative | 1406471 - 1407550 | 39740.3 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | BST98_RS06675 | Not Available | Positive | 1407802 - 1408734 | 35953.5 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | BST98_RS06680 | Not Available | Positive | 1408967 - 1409893 | 35724.4 |
| hypothetical protein | BST98_RS06685 | Not Available | Positive | 1410047 - 1410862 | 30249.3 |
| haaap family serine/threonine permease | BST98_RS06690 | Not Available | Negative | 1410930 - 1412219 | 46319.1 |
| yajq family cyclic di-gmp-binding protein | BST98_RS06695 | Not Available | Negative | 1412819 - 1413301 | 18092.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

